| Enzyme | Restriction site | Origin | Temperature |
| RcaI | ...T CATGA... ...AGTAC T... | Rhodococcus capsulatum | 37 oC |
| RsaI | ...GT AC... ...CA TG... | Rhodobacter sphaeroides | 37 oC |
| RsrII | ...CG GWCCG... ...GCCWG GC... | Rhodobacter sphaeroides | 37 oC |
| Rsr2I | ...CG GWCCG... ...GCCWG GC... | Rhodobacter sphaeroides | 37 oC |
| SacI | ...GAGCT C... ...C TCGAG... | Streptomyces achromogenes | 37 oC |
| SacII | ...CCGC GG... ...GG CGCC... | Streptomyces achromogenes | 37 oC |
| SalI | ...G TCGAC... ...CAGCT G... | Streptomyces albus | 37 oC |
| SapI | ...GCTCTTCN NNNN... ...CGAGAAGNNNN N... | Saccharopolyspora species | 37 oC |
| SatI | ...GC NGC... ...CGN CG... | Staphylococcus arlettae | 37 oC |
| Sau3AI | ...N GATCN... ...NCTAG N... | Staphylococcus aureus | 37 oC |
| Sau96I | ...G GNCC... ...CCNG G... | Staphylococcus aureus | 37 oC |
| SbfI | ...CCTGCA GG... ...GG ACGTCC... | Streptomyces species | 37 oC |
| ScaI | ...AGT ACT... ...TCA TGA... | Streptomyces caespitosus | 37 oC |
| SchI | ...GAGTCNNNNN N... ...CTCAGNNNNN N... | Staphylococcus cohnii | 37 oC |
| ScrFI | ...CC NGG... ...GGN CC... | Salmonella typhi | 37 oC |
| SdaI | ...CCTGCA GG... ...GG ACGTCC... | Streptomyces diastaticus | 37 oC |
| SduI | ...GDGCH C... ...C HCGDG... | Enterococcus durans | 37 oC |
| SexAI | ...A CCWGGT... ...TGGWCC A... | Streptomyces exfoliatus | 37 oC |
| SfaNI | ...GCATCNNNNN NNNNN... ...CGTAGNNNNNNNNN N... | Enterococcus faecalis | 37 oC |
| SfcI | ...C TRYAG... ...GAYRT C... | Enterococcus faecium | 25 oC |
| SfiI | ...GGCCNNNN NGGCC... ...CCGGN NNNNCCGG... | Streptomyces fimbriatus | 50 oC |
| SfoI | ...GGC GCC... ...CCG CGG... | Serratia fonticola | 37 oC |
| Sfr274I | ...C TCGAG... ...GAGCT C... | Streptomyces fradiae | 50 oC |
| Sfr303I | ...CCGC GG... ...GG CGCC... | Streptomyces fradiae | 37 oC |
| SfuI | ...TT CGAA... ...AAGC TT... | Streptomyces fulvissimus | 37 oC |
| SgfI | ...GCGAT CGC... ...CGC TAGCG... | Streptomyces griseoruber | 37 oC |
| SgrAI | ...CR CCGGYG... ...GYGGCC RC... | Streptomyces griseus | 37 oC |
| SgrBI | ...CCGC GG... ...GG CGCC... | Streptomyces griseus | 37 oC |
| SgsI | ...GG CGCGCC... ...CCGCGC GG... | Streptomyces griseus | 37 oC |
| SinI | ...G GWCC... ...CCWG G... | Salmonella enterica | 37 oC |
| SlaI | ...C TCGAG... ...GAGCT C... | Streptomyces lavendulae | 37 oC |
| SmaI | ...CCC GGG... ...GGG CCC... | Serratia marcescens | 25 oC |
| SmiI | ...ATTT AAAT... ...TAAA TTTA... | Streptococcus milleri | 37 oC |
| SmiMI | ...CAYNN NNRTG... ...GTRNN NNYAC... | Flavobacterium mizutaii | 37 oC |
| SmlI | ...C TYRAG... ...GARYT C... | Stenotrophomonas maltophilia | 55 oC |
| SmuI | ...CCCGCNNNN NNN... ...GGGCGNNNNNN N... | Sphingobacterium multivorum | 37 oC |
| SnaBI | ...TAC GTA... ...ATG CAT... | Sphaerotilus natans | 37 oC |
| SpeI | ...A CTAGT... ...TGATC A... | Sphaerotilus natans | 37 oC |
| SphI | ...GCATG C... ...C GTACG... | Streptomyces phaeochromogenes | 37 oC |
| Sse8387I | ...CCTGCA GG... ...GG ACGTCC... | Streptomyces species | 37 oC |
| Sse9I | ...N AATTN... ...NTTAA N... | Sporosarcina species | 55 oC |
| SseBI | ...AGG CCT... ...TCC GGA... | Streptomyces species | 37 oC |
| SsiI | ...C CGC... ...GGC G... | Staphylococcus sciuri | 37 oC |
| SspI | ...AAT ATT... ...TTA TAA... | Sphaerotilus species | 37 oC |
| SspBI | ...T GTACA... ...ACATG T... | Streptomyces species | 37 oC |
| SstI | ...GAGCT C... ...C TCGAG... | Streptomyces stanford | 37 oC |
| SstII | ...CCGC GG... ...GG CGGC... | Streptomyces stanford | 37 oC |
| StrI | ...C TCGAG... ...TAGCT C... | Streptomyces thermodiastaticus | not known |
| StuI | ...AGG CCT... ...TCC GGA... | Streptomyces tubercidicus | 37 oC |
| StyI | ...C CWWGG... ...GGWWC C... | Salmonella typhi | 37 oC |
| StyD4I | ...N CCNGGN... ...NGGNCC N... | Salmonella typhi | 37 oC |
| SwaI | ...ATTT AAAT... ...TAAA TTTA... | Staphylococcus warneri | 25 oC |